tumorigenic human mammary epithelial cell line mcf10a (ATCC)
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Tumorigenic Human Mammary Epithelial Cell Line Mcf10a, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 8191 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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1) Product Images from "Regulation of ER Stress‐Associated Gene Expression by Lifeguard in Human Breast Cancer Cells"
Article Title: Regulation of ER Stress‐Associated Gene Expression by Lifeguard in Human Breast Cancer Cells
Journal: Cancer Reports
doi: 10.1002/cnr2.70687
Figure Legend Snippet: Molecular changes associated with LFG‐specific siRNA treatment in MDA‐MB‐231 and MCF10A cells. (A) LFG mRNA expression measured by qRT‐PCR after 24 and 48 h. Expression was normalized to ACTB and calculated using the 2 −ΔΔCt method with MDA‐MB‐231 control cells as the calibrator. Data represent mean ± SD from three independent experiments. * p < 0.05 versus the corresponding control (Student's t ‐test). (B) Representative fluorescence images showing intracellular Ca 2+ ‐associated fluorescence in MDA‐MB‐231 cells following LFG‐specific siRNA transfection. Images shown are representative of three independent biological experiments ( n = 3). Cells were imaged using identical microscope settings, exposure time, gain, and illumination intensity for all experimental groups. Green fluorescence represents intracellular calcium‐associated fluorescence. Scale bar = 200 μm. (C) Relative expression of selected ER stress‐ and apoptosis‐related genes in MDA‐MB‐231 and MCF10A cells 48 h after LFG‐specific siRNA transfection, determined using the RT 2 Profiler PCR Array. Gene expression was normalized to ACTB (β‐actin) and calculated using the 2 −ΔΔCt method with the corresponding non‐targeting siRNA‐transfected cells as the calibrator. Genes with a fold change ≥ 2 or ≤ −2 were considered differentially expressed. Data are presented as mean ± SD from three independent biological experiments ( n = 3). Statistical comparisons were performed using an unpaired two‐tailed Student's t ‐test, with p < 0.05 considered statistically significant. Error bars represent standard deviation (SD). The asterisk indicates statistical significance compared with the control group ( p < 0.05)
Techniques Used: Expressing, Quantitative RT-PCR, Control, Fluorescence, Transfection, Microscopy, Gene Expression, Two Tailed Test, Standard Deviation
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Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER pLIX-Flag-MYC7A doxycycline-inducible This study N/A pET28b Novagen Cat# 69865-3 pET28b-His-MAX This study N/A pET28b-His-MYCWT This study N/A pET28b-His-MYCKRR3A This study N/A pET28b-His-MYCRQRR4A This study N/A pET28b-His-MYC7A This study N/A pET28b-His-MYCΔBR This study N/A pEGFP-C1 Clontech Cat# 6084-1 lenti dCAS9-VP64_Blast Konermann et al.56 Addgene# 61425 lenti dCas9_Blast This study N/A pLKO.1-puro U6 sgRNA BfuAI Kearns et al.57 Addgene# 50920 pLKO.1-puro U6 gRNA This study N/A pLKO.1-puro U6 gRNA-GFP This study N/A pLKO.1-puro U6 gRNA-eGREB1 This study N/A pLKO.1-puro U6 gRNA-eGREB1-probe This study N/A pLKO.1-puro U6 gRNA-eGREB1-probe G7C This study N/A pLKO.1-puro U6 gRNA-eGREB1-probe G8C This study N/A Software and algorithms Prism Version 9.3.1 GraphPad Software https://www.graphpad.com ImageJ NIH https://imagej.nih.gov/ij/ Bowtie2 v2.5.1 Langmead et al.58 http://bowtie-bio.sourceforge.net/ bowtie2/index.shtml MACS2 Zhang et al.59 https://github.com/macs3-project/MACS CTK Shah et al.60 https://zhanglab.c2b2.columbia.edu/ index.php/CTK_Documentation BWA v0.7.17 Li and Durbin.61 http://bio-bwa.sourceforge.net/ HOMER v4.11.1 Heinz et al.62 http://homer.ucsd.edu/homer/ Gseapy Subramanian et al.63 https://gseapy.readthedocs.io/en/latest/ Samtools v1.13 Li et al.64 https://github.com/samtools/ Bedtools Quinlan et al.65 https://bedtools.readthedocs.io/en/latest/ deeptools v3.5.4.post1 Ramı́rez et al.66 https://deeptools.readthedocs.io/en/develop/ Enrichr Chen et al.67 https://gseapy.readthedocs.io/en/latest/ Cutadapt v4.4 Martin68 https://cutadapt.readthedocs.org/ Python N/A https://www.python.org PEKA Kuret et al.30 https://github.com/ulelab/peka MEME v5.5.4 Bailey et al.31 https://meme-suite.org/meme/ STAR v2.7.11a Dobin et al.69 https://github.com/alexdobin/STAR Cufflinks v2.2.1 Trapnell et al.70 https://cole-trapnell-lab.github.io/cufflinks/ e4 Cell Genomics 5, 100878, July 9, 2025 Article ll |
